FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832534

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832534
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14828765
Sequences flagged as poor quality0
Sequence length50-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG436200.010.480324120
GCGTCGG96300.010.466184120
TGGTCGC392400.010.411743120
GGTGGTC480300.09.805335120
GGTCGCC381500.09.765678120
CTCGGTG624950.09.734151120
TCTCGGT668250.09.633101120
TCGGTGG569750.09.529489120
GTCGCCG400300.09.351997120
CGGTGGT537650.09.094175120
CGCCGTA317350.09.0931120
AGATCTC834500.08.97209120
CGTATCA230050.08.918858120
GATCTCG816100.08.917083120
ATCTCGG735600.08.848984120
CCGTATC282150.08.654057120
GCCGTAT296650.08.615304120
TAGATCT881400.08.453837120
TCGCCGT375700.08.399432120
GTGTAGA1139550.08.170783120
Produced by FastQC (version 0.11.5)