FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12808274
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT358300.010.147236120
GTGGTCG183400.09.846663120
AGATCTC349050.09.522348120
GGTGGTC208750.09.225725120
TGGTCGC163000.09.201834120
TCGGTGG252050.09.16423120
AGTGTAG499450.09.105402120
GGTCGCC164800.09.064922120
GTGTAGA483000.09.042868120
GATCTCG343450.08.82165120
AGAGTGT600000.08.689413120
GCGTCGG78900.08.668617120
ATCTCGG330150.08.631857120
GTAGATC487650.08.5260315120
GAGTGTA544250.08.47715120
CTCGGTG282350.08.329525120
TCTCGGT301900.08.147844120
CGGTGGT252750.08.094409120
TAGGGAA941250.07.9803376120
TGTAGAT517800.07.9253054120
Produced by FastQC (version 0.11.5)