FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11182816
Sequences flagged as poor quality0
Sequence length67-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGT348600.08.398178120
TAGATCT408850.08.395674120
CTCGGTG338900.08.070925120
AGTGTAG548850.07.9518185120
GTGGTCG244450.07.943208120
TCGGTGG308650.07.8880963120
GTGTAGA537700.07.88193120
GGTGGTC268250.07.776304120
GTAGATC541200.07.7754173120
AGATCTC399050.07.7733083120
GAGTGTA588750.07.7600794120
TGTAGAT550700.07.7067823120
ATCTCGG381300.07.5675955120
TGGTCGC219200.07.472616118-119
AGAGTGT632400.07.42408120
GATCTCG405300.07.3567934120
GGTCGCC227350.07.2978945120
GCGTCGG81600.07.2197037120
CGGTGGT309100.07.0597787120
AAGAGTG688050.06.9721446120
Produced by FastQC (version 0.11.5)