FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13243236
Sequences flagged as poor quality0
Sequence length51-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC3350.002339947512.5371211
AAAAAAA1216600.012.337767120
CGTATCA486300.09.745852120
CCCCCCT7601.7600512E-59.4735381
CGCCGTA623850.09.433783120
GCGTCGG70050.09.335023120
CCGTATC547300.09.087116120
GCCGTAT586750.08.97715120
GTATCAT504550.08.893945120
GGTCGCC761850.08.7407875120
TGGTCGC806150.08.662318120
TCGCCGT703700.08.48267120
GGTGGTC934150.08.329528120
TCATTAA422150.08.270908120
GTCGCCG742350.08.218816120
ATCATTA485950.08.1973505120
GTGGTCG863850.08.062893120
CCCCCTA8355.0215947E-47.90407041
CGGTGGT1019700.07.818971120
CATTAAA437000.07.7290125120
Produced by FastQC (version 0.11.5)