FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12649979
Sequences flagged as poor quality0
Sequence length72-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC343150.08.846844120
AGATCTC541250.08.435455120
ATCTCGG507800.08.364931120
GTGGTCG322600.08.145759120
TAGATCT556500.08.118048120
GATCTCG526900.07.8681326120
GTGTAGA715750.07.787107120
CTCGGTG455700.07.675582120
GTAGATC695800.07.596495120
CGGTGGT393200.07.568154120
AGTGTAG740850.07.547575120
TCGGTGG406900.07.5345097120
TGGTCGC295150.07.521089120
GGTCGCC302950.07.485876120
AGAGTGT857150.07.398437120
TGTAGAT726250.07.286253120
GAGTGTA795600.07.224246120
TCTCGGT474550.07.181053120
GCGTCGG112900.06.908301120
CGTATCA203850.06.710362120
Produced by FastQC (version 0.11.5)