FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833180

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833180
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13326523
Sequences flagged as poor quality0
Sequence length83-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG201650.08.330281120
GGTCGCC179600.08.284098120
TGGTCGC187150.08.142237120
AGTGTAG440350.07.656639120
GGTGGTC223100.07.287349120
GCGTCGG49550.07.2645288120
ATCTCGG301950.07.2519984120
GAGTGTA463550.07.079305120
CTCGGTG269150.07.0435658120
AGAGTGT504300.07.030697120
AGATCTC335900.07.0191154120
CCCTCCC29250.06.97366482
GTGTAGA436750.06.9230504120
TAGATCT343100.06.8543334120
GTCGCCG188450.06.844507120
GTAGATC444650.06.813542120
TAGGGAA754100.06.7781396120
GTAGGGA776300.06.715681120
CCCTCTC40250.06.707866
CGGTGGT265750.06.6821823120
Produced by FastQC (version 0.11.5)