FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11768743
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT232500.09.701558120
AGATCTC226850.09.04407120
AGAGTGT383150.08.673964120
AGTGTAG327450.08.390679120
GATCTCG229850.08.169143120
GTGTAGA323550.07.9912095120
TAGGGAA596250.07.757158120
TCTCGGT207850.07.6484337120
GAGTGTA350350.07.636764120
TGGTCGC131450.07.621361120
TCGGTGG199550.07.575746120
GTAGATC327500.07.565112120
CTCGGTG201850.07.5191445118-119
GGTGGTC165500.07.4669952120
CGGTGGT202350.07.4116254120
AAGAGTG429500.07.360785120
GTGGTCG143800.07.3005533120
GGGAAAG603350.07.2681637120
ATCTCGG221850.07.1657734120
TGTAGGG663300.07.1448603120
Produced by FastQC (version 0.11.5)