FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833190

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833190
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12810844
Sequences flagged as poor quality0
Sequence length55-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA2400900.016.298946120
TCTCGGG27100.011.95393120
TCATTAA826600.010.596042120
CATTAAA771900.010.492016120
CGTATCA1133050.010.197493120
GCGTCGG77150.010.18642120
ATCATTA929400.09.998503120
GGTTGAG48100.09.9793521
TATCATT1056050.09.776482120
GTATCAT1071950.09.737802120
CCGTATC1254150.09.652902120
GGTCCCA16800.09.6429941
ATTAAAA809850.09.407742120
GGTCGAA51600.09.3024571
CGCCGTA1454350.09.11611120
GCCGTAT1352050.09.087061120
TTAAAAA794300.09.063228120
GGACCCT6856.212996E-48.7592491
GGTGTAA65250.08.64381
GGTTGAT83000.08.6025321
Produced by FastQC (version 0.11.5)