FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833192

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833192
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14514708
Sequences flagged as poor quality0
Sequence length52-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT295800.08.519245120
GTGGTCG187850.08.144773120
AGATCTC298400.07.479871120
AGTGTAG401850.07.4355893120
TCGGTGG252350.07.39447120
TGGTCGC177350.07.341394120
AGAGTGT471850.07.3370566120
GATCTCG294950.07.2825694120
GTGTAGA410250.07.2102165120
GAGTGTA436150.07.1397247120
GTAGATC406050.07.0927024120
TCTCGGT278500.06.9802313120
GCGTCGG55100.06.969127120
GGTGGTC206650.06.9392495118-119
CTCGGTG255250.06.922605118-119
TGTAGGG768950.06.9133034120
ATCTCGG285750.06.5721593120
GTAGGGA724000.06.5718045120
GTGTAGG826650.06.568662120
AAGAGTG544000.06.551452120
Produced by FastQC (version 0.11.5)