FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833212

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833212
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15196753
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA884850.010.835666120
GTGGTCG634500.09.0968685120
TGGTCGC581500.08.883864120
GGTGGTC683850.08.554453120
CGCCGTA475100.08.5244665120
TCATTAA300950.08.393368120
GGTCGCC558600.08.324329120
TCGGTGG812850.08.23763120
GCGTCGG103700.08.215956120
CGTATCA380250.08.173518120
GCCGTAT459650.08.132223120
TCGCCGT541400.08.045755120
CGGTGGT775950.07.9875774120
CTCGGTG854500.07.9063277120
GTCGCCG571550.07.6633224120
CCGTATC450800.07.533226120
AGATCTC1068400.07.519608120
TCTCGGT895100.07.5138254118-119
CATTAAA305400.07.426279120
GTATCAT395250.07.347202120
Produced by FastQC (version 0.11.5)