FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833214

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833214
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13130097
Sequences flagged as poor quality0
Sequence length60-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA956000.010.036587120
TGGTCGC553750.08.5715275120
CGTATCA351300.08.523499120
GTGGTCG602100.08.451284120
GGTCGCC543200.08.185664120
GGTGGTC649300.08.104938120
GTATCAT368150.07.921491120
GCGTCGG109250.07.9092727120
GCCGTAT440100.07.908099120
CTCGGTG820950.07.7990766120
TCGGTGG759200.07.793206120
CGCCGTA482900.07.7290945120
GATCTCG1009250.07.5747123120
CGGTGGT724050.07.5665464120
TCTCGGT854700.07.3998404120
TAGATCT1063700.07.3787713120
CCGTATC413300.07.3755393120
ATCTCGG920000.07.0768075120
AGATCTC1021750.07.053324120
TCGCCGT561500.06.967762120
Produced by FastQC (version 0.11.5)