FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13036609
Sequences flagged as poor quality0
Sequence length50-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC237100.09.416421120
GTGGTCG260700.09.162555120
TCTCGGT392500.09.05225120
TAGATCT501650.08.913124120
AGATCTC483750.08.8831415120
TCGGTGG344950.08.71678120
ATCTCGG432700.08.668973120
GGTCGCC237300.08.649736120
GGTGGTC286850.08.599268120
CTCGGTG381000.08.238559120
GAGTGTA722450.08.191127120
GTGTAGA653650.08.18101120
AGTGTAG675950.08.177482120
AGAGTGT786100.08.153948120
GATCTCG469700.08.139419120
CGGTGGT328700.07.9974017120
GTAGATC640950.07.9966526120
CGTATCA160150.07.607528120
TGTAGAT693950.07.368616120
GCGTCGG80800.07.2792935120
Produced by FastQC (version 0.11.5)