FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833222

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833222
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13656211
Sequences flagged as poor quality0
Sequence length52-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT239400.07.6537166120
AGTGTAG309350.07.3795543120
AGAGTGT359000.07.02832120
AGATCTC252300.06.9766517120
AAGAGTG399150.06.8029766120
ATCTCGG240400.06.622288120
GTGTAGA315700.06.603156120
GAGTGTA327300.06.599106118-119
GTAGATC309000.06.582181118-119
GTAGGGA538100.06.419504120
GTGGTCG162000.06.3412924120
TAGGGAA529950.06.3255157120
TGGTCGC148850.06.2961116120
GATCTCG267600.06.263467120
TGTAGAT351700.06.217642120
GTCGTGT698000.06.179676120
GTGTAGG610000.06.1257215120
TCGGTGG214550.06.1041417120
TGTAGGG569950.06.102931120
CGTGTAG638050.06.101224120
Produced by FastQC (version 0.11.5)