FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13553799
Sequences flagged as poor quality0
Sequence length56-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG104400.011.263395120
TGGTCGC392650.09.305194120
TCGGTGG558600.08.989556120
AAAAAAA611150.08.864488120
TAGATCT788100.08.807766120
CTCGGTG599650.08.664307120
GTGGTCG428600.08.5666895120
AGATCTC753650.08.430241120
ATCTCGG684200.08.38279120
GGTCGCC390750.08.337091120
TCTCGGT623850.08.183953120
GTAGATC976300.08.08698120
CGTATCA264850.08.041594120
GATCTCG722800.07.984922120
GGTGGTC468600.07.925051120
CGCCGTA354900.07.5564055120
GTGTAGA1006250.07.4885454120
CCGTATC320400.07.4150896120
AGTGTAG1044700.07.3909574120
TGTAGAT1001600.07.388567118-119
Produced by FastQC (version 0.11.5)