FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15474731
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG95150.010.152326120
GGTGGTC389600.08.701176120
CGGTGGT447250.08.505255120
TCGGTGG464350.08.25665120
GTGGTCG354100.08.099355120
AGATCTC613100.07.966023120
GGTCGCC325300.07.931089120
TGGTCGC322650.07.8474627120
CTCGGTG508450.07.847328120
AGTGTAG829050.07.7003303120
ATCTCGG562450.07.669965120
GTAGATC814000.07.577347120
TAGATCT626900.07.541629118-119
GATCTCG606900.07.533317120
TCTCGGT524550.07.4348965120
GAGTGTA885950.07.354769120
GTGTAGA805650.07.328197120
AAAAAAA775650.07.2403326120
AGAGTGT947750.07.2360387120
GCCGTAT290050.06.9918528120
Produced by FastQC (version 0.11.5)