FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833258

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833258
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11448363
Sequences flagged as poor quality0
Sequence length72-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT306100.09.545889120
AGATCTC302300.08.673493120
AGTGTAG407400.08.379961120
TCTCGGT239000.08.2343120
GAGTGTA433850.08.214811120
ATCTCGG271000.08.191872120
CTCGGTG236400.08.17258120
TCGGTGG218250.08.054974120
GTGGTCG171300.07.9859805120
GATCTCG305650.07.9698915120
GTGTAGA399900.07.861956120
TGGTCGC152250.07.802946120
AGAGTGT470050.07.7481027120
AAGAGTG519500.07.622705120
GTAGATC400950.07.5420456118-119
GGTGGTC183900.07.5366964120
CGGTGGT215400.07.3816066120
TAGGGAA714850.07.3274026120
GGTCGCC159800.07.171456120
GGGAAAG696650.07.0795875120
Produced by FastQC (version 0.11.5)