FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11829453
Sequences flagged as poor quality0
Sequence length55-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA852200.011.662033120
GTATCAT348150.09.084473120
ATCATTA324950.08.883499120
CGTATCA347700.08.302392118-119
GCGTCGG112650.08.257642120
TGGTCGC575150.07.951139120
GCCGTAT448850.07.928828120
TCATTAA282100.07.9141216118-119
GGTCGCC567300.07.7439256118-119
CCGTATC425400.07.716944120
CATTAAA286350.07.6813874118-119
CTCGGTG819450.07.6752815120
GGTGGTC672950.07.6249824120
GTGGTCG621900.07.6043344120
CGCCGTA486350.07.551931120
GTCGCCG602400.07.5018005120
TCGCCGT567800.07.4093165120
TATCATT378200.07.204268120
TAGATCT1033450.07.0963864120
ATCTCGG911050.07.081443120
Produced by FastQC (version 0.11.5)