FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833266

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833266
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15113691
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA969950.011.487594120
GCGTCGG106900.08.531638120
TGGTCGC651750.08.386947120
GTGGTCG708850.08.329276120
GGTCGCC638900.08.161189120
CGTATCA424700.08.109539120
CGCCGTA552900.08.019815120
GTATCAT429150.07.8017426120
CGGTGGT838800.07.6182942120
GGTGGTC760100.07.6018987120
TCGGTGG877850.07.532304120
TCATTAA354300.07.4515743120
ATCATTA403050.07.398846120
GCCGTAT531400.07.294197120
CCGTATC487650.07.247256120
TCTCGGT983000.07.2210064120
CATTAAA353250.07.2189374120
GTCGCCG671850.07.117911120
CTCGGTG937900.07.056438120
ATCTCGG1056250.07.0326734120
Produced by FastQC (version 0.11.5)