FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833274

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833274
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13755206
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG276100.08.496423120
TAGATCT460400.08.300989120
GGTGGTC299850.08.023541120
TGGTCGC245250.07.975067120
ATCTCGG418650.07.882017120
CTCGGTG361400.07.802531120
GATCTCG449150.07.6940827120
AGATCTC446200.07.610491120
TCTCGGT377950.07.556112120
GCGTCGG77950.07.4658866120
GGTCGCC252350.07.4653835120
GTGTAGA601800.07.4272814120
TCGGTGG356150.07.4121723120
AGTGTAG611200.07.146178118-119
GAGTGTA651500.07.1369567120
GTAGATC594300.07.107105120
TGTAGAT623150.07.1054163120
AGAGTGT696850.07.0685387120
GTCGCCG275850.07.046895120
CGGTGGT351000.07.0423217120
Produced by FastQC (version 0.11.5)