FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13541254
Sequences flagged as poor quality0
Sequence length56-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATCA300750.09.87404120
GTGGTCG564600.09.308046120
TGGTCGC515800.09.048854120
GTATCAT312350.09.02717120
GGTCGCC511400.08.880358120
AAAAAAA868600.08.723261120
GGTGGTC621650.08.637189120
GCCGTAT423650.08.284074120
TCGGTGG716600.08.237845120
CCGTATC379300.08.208802120
TCATTAA275550.08.033804120
CGGTGGT690500.07.949736120
ATCTCGG882950.07.664226120
TAGATCT993150.07.5205536120
ATCATTA306300.07.4818964120
GCGTCGG135550.07.4796705120
CTCGGTG791650.07.4341464120
GATCTCG946050.07.3940053120
CGCCGTA470700.07.3795466120
AGATCTC955350.07.3031883120
Produced by FastQC (version 0.11.5)