FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833286

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833286
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15710881
Sequences flagged as poor quality0
Sequence length62-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG93100.09.860248120
TGGTCGC273900.09.222234120
AGATCTC519150.08.748813120
TAGATCT539200.08.468120
GGTGGTC331950.08.332481120
GTGGTCG302300.08.296295120
GAGTGTA782900.08.207848120
ATCTCGG473700.08.182296120
GATCTCG504150.08.116535120
AGTGTAG730850.08.111008120
GGTCGCC278500.08.100443120
CGGTGGT397150.08.0976120
TCGGTGG404250.08.059274120
CTCGGTG412750.08.053205120
TCTCGGT433500.07.9168615120
GTGTAGA715300.07.6330705120
GTAGATC701400.07.5020494120
AGAGTGT843500.07.49013120
TGTAGAT750550.07.4184713120
AAGAGTG929750.07.208304120
Produced by FastQC (version 0.11.5)