FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833290

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833290
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14538893
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG84400.09.745141120
AGATCTC339500.08.576537120
TAGATCT337050.08.25951118-119
AGTGTAG458900.08.15042120
GTGTAGA452000.07.9029374120
AGAGTGT536300.07.824911120
GATCTCG356250.07.6677256120
GTAGATC448850.07.6641397120
GAGTGTA495850.07.6520324120
GGTGGTC234600.07.3957095120
GTGGTCG202450.07.324689120
AAGAGTG594300.07.2935925120
TCTCGGT306550.07.207033120
TGGTCGC183600.07.193827120
ATCTCGG327700.07.1815743120
TGTAGAT489350.07.14025120
TCGGTGG272150.07.0370784120
TAGGGAA814350.07.0109916120
GTAGGGA850150.06.8852396120
CTCGGTG305150.06.8466144120
Produced by FastQC (version 0.11.5)