FastQCFastQC Report
Wed 31 Aug 2022
EGAF00004833450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length42-251
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGAT15.0No Hit
CCTACGGGGGGCTGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCCCGGTAGTC15.0No Hit
CCTACGGGCGGCTGCAGGAAGAAAGGATTAGATACCCGTGTAGTC15.0No Hit
CCTACGGGAGGCAGCAGACGTCGGCAGCGTCAGATGTGGATTAGATACCCCAGTAGTC15.0No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT15.0No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCGTGTAGTC15.0No Hit
CCTACGGGAGGCTGCAGATGAGGATTAGATACCCGAGTAGTC15.0No Hit
CCTACGGGGGGCAGCAGATGTGGATTAGATACCCTTGTAGTC15.0No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGGACAATGGGCGAAAGCCTGAT15.0No Hit
CCTACGGGTGGCTGCAGACGAGGACTAGATACCCTTGTAGTC15.0No Hit
CCTACGGGTGGCTGCAGTCGTCGGCAACGTCAGATGTGGATTAGATACCCGGGTAGTC15.0No Hit
CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGAT15.0No Hit
CTTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC15.0No Hit
CCTACGGGTGGCTGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGAC15.0No Hit
CCTACGGGCGGCAGCAGTAGGGAATCTTCGGCAATGGACGAAAGTCTGAC15.0No Hit
CCTACGGGCGGCTGCAGTCGTCGGCAGCGTCAGATGCGGATTAGATACCCTTGTAGTC15.0No Hit
CCTACGGGTGGCTGCAGTGGGGAATATTGCACAGTGGGCGCAAGCCTGAT15.0No Hit
CCTACGGGGGGCTGCAGTCGTCGGCGGCGTCAGATGTGGATTAGATACCCCAGTAGTC15.0No Hit
CCTACGGGGGGCTGCAGTCGTCGGCAGCGTCAGATGTGGATTAGATACCCCTGTAGTC15.0No Hit
CCTACGGGTGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGCCTGAT15.0No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)