FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13927413
Sequences flagged as poor quality0
Sequence length60-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGTGG398450.08.583154120
ATCTCGG486000.08.2715025120
GATCTCG508200.08.240747120
GGTGGTC334300.08.238007120
TGGTCGC286750.08.223088120
GCGTCGG95400.08.050214120
AGATCTC522000.08.0458765120
TAGATCT542750.08.03675120
GAGTGTA769550.07.866837120
GGTCGCC292550.07.8139515120
CTCGGTG429050.07.789205120
GTGGTCG310600.07.7848353120
CGGTGGT385600.07.6866264120
TCTCGGT447950.07.64808120
AGTGTAG719800.07.618688120
GTAGATC703550.07.538816120
GTGTAGA705850.07.531251120
AGAGTGT832550.07.300371120
AAGAGTG911200.07.085075120
TGTAGAT730350.07.0732327120
Produced by FastQC (version 0.11.5)