FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15048981
Sequences flagged as poor quality0
Sequence length51-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT498250.08.611179120
GTGGTCG283100.08.605776120
GTGTAGA653050.08.205573120
GATCTCG489150.08.133459120
AGATCTC486100.08.085736120
TGGTCGC255750.07.977506120
TCTCGGT408800.07.9119177120
AGTGTAG670300.07.9048815120
ATCTCGG449600.07.8746195120
GAGTGTA711550.07.6152854120
AAGAGTG846950.07.5739737120
GTAGATC663600.07.568729120
GGTCGCC261450.07.528164120
TGTAGAT691950.07.518795120
TCGGTGG365550.07.501935120
AGAGTGT769850.07.4595120
CTCGGTG395600.07.326469120
GGTGGTC318300.07.314741120
TAGGGAA1162700.07.261566120
GCGTCGG100900.07.196115120
Produced by FastQC (version 0.11.5)