FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14783487
Sequences flagged as poor quality0
Sequence length74-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1010150.09.808103120
GGTCGCC593150.08.58977120
TGGTCGC610500.08.276763120
GTGGTCG652550.08.21299120
CGCCGTA511000.08.042396120
CGTATCA368850.07.9817204120
GCCGTAT471750.07.9091516120
GGTGGTC704800.07.859868120
CCGTATC436350.07.848562120
CTCGGTG879300.07.632491120
CGGTGGT776400.07.560652120
GTATCAT404350.07.548427120
TCGGTGG810550.07.4422474120
ATCTCGG972100.07.4230485120
GATCTCG1048000.07.321159120
GTCGCCG622300.07.2991486120
AGATCTC1082200.07.250799120
TAGATCT1128750.07.239213120
TCTCGGT906050.07.1418996120
CATTAAA359450.06.619221120
Produced by FastQC (version 0.11.5)