FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11996686
Sequences flagged as poor quality0
Sequence length52-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1449150.014.713714120
TCATTAA543400.010.488713120
CGTATCA700300.010.074917120
GTATCAT677150.09.816872120
CATTAAA522550.09.701684120
ATCATTA608400.09.6442375120
CCGTATC790700.09.613535120
GCCGTAT859300.09.544254120
CGCCGTA926500.09.370038120
GGTCGCC1125250.08.893348120
TGGTCGC1195700.08.730623120
TATCATT712500.08.605661120
TCGCCGT1038800.08.472594120
GTCGCCG1096350.08.257684120
GTGGTCG1289500.08.044368120
GGTGGTC1374900.07.7148843120
GTAGGGG24350.07.391635120
ATTAAAA636150.07.3750587120
TCGGTGG1574650.07.3572664120
CGGTGGT1487700.07.2428455120
Produced by FastQC (version 0.11.5)