FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14987599
Sequences flagged as poor quality0
Sequence length55-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1287950.010.91477120
GCGTCGG95550.010.486416120
CCCCCCA7158.53335E-610.0695311
CGTATCA495750.09.791001120
CCGTATC570300.09.384319120
GGTCGCC762750.09.163999120
GCCGTAT606150.09.027261120
GTGGTCG876550.09.021526120
TGGTCGC808600.09.007956120
TCTCGGG35150.08.705349120
GGTGGTC944150.08.68698120
CGCCGTA639950.08.457253118-119
TCGCCGT728200.08.395853120
GTCGCCG765000.08.329221120
GTATCAT514550.08.31387120
CGGTGGT1040450.08.107845120
TCGGTGG1108200.08.050709120
TCATTAA435050.07.847194120
CTCGGTG1185100.07.81182120
ATCATTA499400.07.484811120
Produced by FastQC (version 0.11.5)