FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10935832
Sequences flagged as poor quality0
Sequence length64-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA879500.013.692315120
CGTATCA384150.09.152973120
GTATCAT376450.08.591062120
CATTAAA298750.08.47559120
TCATTAA299400.08.336945120
GTGGTCG678150.08.334711120
GGTCGCC614300.08.282868120
GCCGTAT491250.08.268971120
CGCCGTA526000.08.258823120
ATCATTA340050.08.081428120
GGTGGTC722350.07.891169120
TCGGTGG834250.07.8252473120
TGGTCGC625200.07.755458118-119
TATCATT390400.07.6846766120
CGGTGGT793500.07.5843678120
CTCGGTG894750.07.510722120
GTCGCCG629800.07.450227120
CCGTATC465000.07.445404120
GCGTCGG94350.07.4406238120
TCGCCGT598850.07.2140613120
Produced by FastQC (version 0.11.5)