FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13284842
Sequences flagged as poor quality0
Sequence length54-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGTGTA291550.09.568936120
AGTGTAG272950.09.363759120
GTGTAGA278600.09.130794120
AGAGTGT333250.08.9296665120
TAGATCT203050.08.421039120
GTAGGGA563650.08.259922120
TAGGGAA536450.08.16427120
GTGTAGG668450.08.158658120
TGTAGGG605600.07.96515120
AAGAGTG374150.07.9054193120
GTAGATC298350.07.8828597120
TGTAGAT309300.07.739568120
TCGTGTA753450.07.716016120
AAAGAGT441900.07.6437793120
CGTGTAG706850.07.6390443120
AGATCTC234850.07.5617948120
GTCGTGT807200.07.31371120
GGGAAAG557500.07.231829120
AGGGAAA591750.07.0971427120
CGTCGTG892600.07.050864120
Produced by FastQC (version 0.11.5)