FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833586

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833586
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13644107
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG385100.010.017386120
CTCGGTG554600.09.281633120
TGGTCGC345550.09.201994120
CGGTGGT484850.09.094878120
TCGGTGG504900.09.030778120
CGTATCA221950.08.839131120
AGATCTC696700.08.835243120
TAGATCT732950.08.807546120
GATCTCG677750.08.710488120
GGTCGCC342500.08.653331120
GGTGGTC421100.08.548364120
TCTCGGT578350.08.360905118-119
CCGTATC271850.08.055277120
GTGTAGA936800.08.030963120
ATCTCGG627100.08.002729118-119
CGCCGTA308100.07.9643173120
GTCGCCG383950.07.7972746120
GTAGATC909400.07.6593904120
AGTGTAG968450.07.6569924120
GAGTGTA1030400.07.627503120
Produced by FastQC (version 0.11.5)