FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833592

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833592
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14536110
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG76050.015.866551120
AAAAAAA883850.09.665226120
GGTCGCC493450.08.832409120
GTGGTCG560950.08.625745120
TGGTCGC513000.08.577729120
TCGGTGG726200.08.498115120
GGTGGTC614150.08.484592120
CGTATCA348700.08.4186535120
ATCTCGG889450.08.166756120
CGGTGGT686750.08.059683120
CTCGGTG783200.08.048266120
GCCGTAT423150.08.0440445120
GTCGCCG500150.07.8618865120
AGATCTC1005450.07.7439976120
CGCCGTA424550.07.7205725120
GTATCAT389250.07.695869120
TAGATCT1042700.07.6573405120
TCTCGGT824750.07.6428037120
GATCTCG958700.07.4578695120
CCGTATC403500.07.4196124118-119
Produced by FastQC (version 0.11.5)