FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16838831
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG106300.011.176711120
GTGGTCG386450.09.999417120
GGTGGTC443050.09.372069120
TCGGTGG522500.09.325065120
GGTCGCC353700.09.279709120
TGGTCGC352300.09.26549120
AGATCTC734200.09.227024120
ATCTCGG646850.09.192893120
CTCGGTG569950.09.033013120
GATCTCG723600.08.930983120
TAGATCT765850.08.837868120
GTGTAGA1003550.08.771487120
AGTGTAG1048600.08.612094120
TCTCGGT592450.08.421563118-119
CGGTGGT512050.08.355247120
GTAGATC990200.08.308003120
GAGTGTA1125850.08.271672120
AGAGTGT1218050.08.216995120
TGTAGAT1020050.08.182533120
AAGAGTG1326550.07.6851416120
Produced by FastQC (version 0.11.5)