FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833596

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833596
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15606536
Sequences flagged as poor quality0
Sequence length55-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC467200.09.25969120
GGTGGTC555850.08.700446120
GTGGTCG505350.08.620023120
GGTCGCC451950.08.563147120
AAAAAAA943100.08.4171715120
CGGTGGT641100.08.413912120
TCGGTGG671600.08.2462225120
TCTCGGT753350.08.115989120
GTCGCCG464350.08.037278120
ATCTCGG812550.08.02682120
CGTATCA320550.07.9740305120
CTCGGTG710000.07.9523473120
TCGCCGT455250.07.947516120
GATCTCG862750.07.82405120
CGCCGTA408350.07.787667120
GCCGTAT394350.07.775048120
AGATCTC899500.07.6844954120
TAGATCT940950.07.6584435120
GTAGATC1166100.07.3374944120
CCGTATC386250.07.2701173120
Produced by FastQC (version 0.11.5)