FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11465058
Sequences flagged as poor quality0
Sequence length58-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT203450.09.900614120
AGTGTAG291100.09.646055120
GAGTGTA313600.09.414136120
AGAGTGT341900.08.93387120
AGATCTC203850.08.878321120
GATCTCG206650.08.787121120
GTGTAGA288900.08.762128120
ATCTCGG191050.08.5919285120
TCTCGGT168050.08.515565120
GTAGGGA601150.08.421787120
TAGGGAA575100.08.364147120
CTCGGTG165500.08.2108120
GTAGATC305550.08.087878120
GGTGGTC133150.08.083267120
TGTAGAT327000.08.035423120
AAGAGTG388450.07.9251933120
GTGTAGG700550.07.853387120
TGTAGGG639650.07.7738857120
AGGGAAA623950.07.584029120
CGTGTAG743200.07.5806937120
Produced by FastQC (version 0.11.5)