FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13218095
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC277650.09.208536120
CTCGGTG348100.08.534535120
ATCTCGG397200.08.431477120
TGGTCGC223150.08.364541120
GTGGTCG247450.08.343527120
GGTCGCC224000.08.306008120
GATCTCG439750.08.161575120
TAGATCT451800.08.156444120
AGATCTC445850.08.144141120
TCTCGGT358850.08.128343120
TCGGTGG327650.08.059743120
GTGTAGA591350.08.058507120
AGTGTAG602750.08.045496120
GTAGATC588900.07.8576293120
GAGTGTA643850.07.764956120
AGAGTGT698950.07.573579120
CGGTGGT323200.07.258349118-119
GCGTCGG72300.07.139024120
AAGAGTG760500.07.118459120
TGTAGAT625050.06.9806895120
Produced by FastQC (version 0.11.5)