FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13651165
Sequences flagged as poor quality0
Sequence length64-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC290200.08.848145120
GGTCGCC292950.08.560293120
TAGATCT564400.08.556866120
GCGTCGG83750.08.524482120
GGTGGTC354900.08.469106120
GTGGTCG317450.08.353198120
TCGGTGG413050.07.8723154120
AGATCTC543500.07.7599983120
ATCTCGG504700.07.6908937120
AGTGTAG741750.07.6756377120
TCTCGGT466000.07.6343946120
CTCGGTG447000.07.5159926120
GATCTCG533600.07.4879723120
GAGTGTA788000.07.3469477120
GTAGATC733300.07.240481120
GTGTAGA723850.07.210685120
AGAGTGT848800.07.053927120
CGGTGGT409300.07.028339118-119
CGTATCA215400.07.0187645120
AAGAGTG926650.06.9533544120
Produced by FastQC (version 0.11.5)