FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11214321
Sequences flagged as poor quality0
Sequence length63-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT330450.08.206848120
AGATCTC331100.08.08201120
CTCGGTG271300.07.9615283120
GAGTGTA455500.07.8505774120
GGTGGTC227300.07.628552120
AGAGTGT487950.07.5990076120
AGTGTAG424150.07.468927120
ATCTCGG303500.07.4529185120
TGGTCGC181850.07.4235725120
GTGTAGA422900.07.39169120
TCGGTGG256500.07.321511120
GTGGTCG196500.07.2059817120
TCTCGGT279150.07.158132118-119
AAGAGTG540000.07.0109897120
GTAGATC432500.06.888525118-119
TAGGGAA749350.06.75774120
GATCTCG335300.06.692398120
CGGTGGT267200.06.624137120
TGTAGGG815650.06.5983043120
GCGTCGG65700.06.5752287120
Produced by FastQC (version 0.11.5)