FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11888937
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC245300.08.756536120
GCGTCGG77050.08.410038120
TAGATCT465950.08.408544120
AGATCTC452850.08.373549120
ATCTCGG416600.08.33885120
GTGGTCG268850.08.324261120
TCGGTGG347050.08.056395120
GTGTAGA619100.08.02447120
CTCGGTG362650.08.00764120
AGTGTAG630550.07.9548798120
TCTCGGT378050.07.9512486120
GATCTCG448650.07.8768845120
AGAGTGT727700.07.857554120
GAGTGTA676400.07.850305120
CGGTGGT334550.07.8193803120
GGTGGTC291750.07.712004120
AAAAAAA551650.07.2545266120
GTAGATC636300.07.251223120
TGTAGAT636100.07.064856120
AAGAGTG788350.06.9980893118-119
Produced by FastQC (version 0.11.5)