FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13833685
Sequences flagged as poor quality0
Sequence length56-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG80650.013.242855120
AAAAAAA1453300.013.220017120
GCCGTAT754500.09.638498120
CGCCGTA789150.09.519427120
CGTATCA628950.09.435093120
CCGTATC702900.09.091218120
ATCATTA551950.09.011992120
TCATTAA488050.08.876441120
TGGTCGC1041900.08.828403120
GTCGCCG945350.08.82243120
GGTCGCC974250.08.800915120
TCGCCGT885750.08.664139120
GTATCAT621700.08.628248120
CATTAAA478300.08.618315120
GTGGTCG1121750.08.4246235120
GGTGGTC1203550.08.415391120
TATCATT658750.08.115645120
CGGTGGT1320300.07.8984733120
CTCGGTG1494850.07.710735120
TCGGTGG1405950.07.6392226120
Produced by FastQC (version 0.11.5)