FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12725470
Sequences flagged as poor quality0
Sequence length59-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG86300.011.401682120
TGGTCGC432150.09.010442120
AAAAAAA777300.08.961474120
GTGGTCG470700.08.50193120
GGTCGCC422150.08.484837120
CTCGGTG662250.08.189971120
GGTGGTC523900.08.005062120
GTCGCCG447750.07.7585196120
CGTATCA271550.07.7552037120
TCGGTGG604650.07.6901274120
CCGTATC330250.07.6484804120
TAGATCT835850.07.6374645120
CGCCGTA386350.07.531764120
ATCTCGG733150.07.496155120
GTATCAT290950.07.444315120
TCTCGGT679850.07.413138120
GTAGATC1010200.07.2695904120
AGATCTC804600.07.1809535120
GCCGTAT366000.07.1308956120
CGGTGGT584700.07.095793118-119
Produced by FastQC (version 0.11.5)