FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15749039
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC355550.09.702656120
GTGGTCG394100.09.210271120
GGTCGCC354100.08.658016120
CGCCGTA332000.08.4392185120
GGTGGTC441500.08.411693120
ATCTCGG631200.08.354979120
TCTCGGT577200.08.221927120
GATCTCG684200.08.198832120
CTCGGTG553550.08.096312120
CGTATCA251200.08.048848120
TCGGTGG516800.07.998713120
TAGATCT714550.07.984934120
AGATCTC698100.07.7520604118-119
CGGTGGT510600.07.637584120
GCCGTAT320350.07.584968120
GTGTAGA915950.07.493379120
AGTGTAG939350.07.3258734120
GTCGCCG392950.07.2981715120
GTAGATC908100.07.122108120
TGTAGAT932700.07.0886426120
Produced by FastQC (version 0.11.5)