FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15421435
Sequences flagged as poor quality0
Sequence length62-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG434650.08.735452120
TGGTCGC392800.08.626122120
TAGATCT770200.08.580195120
GGTGGTC476850.08.466335120
CTCGGTG612400.08.289522120
AGATCTC739800.08.283117120
AAAAAAA688850.08.093405120
TCTCGGT634300.08.088559120
TCGGTGG552250.07.9739995120
GCGTCGG126100.07.908624120
ATCTCGG691050.07.832913120
GATCTCG727050.07.7921157120
GGTCGCC397900.07.775731120
GTGTAGA986150.07.6029053120
TGTAGAT986950.07.4871745120
AGTGTAG1016900.07.4616194120
AGAGTGT1165400.07.4026527120
CGGTGGT543050.07.3857636118-119
GAGTGTA1084250.07.358285120
GTAGATC980000.07.3441024120
Produced by FastQC (version 0.11.5)