FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833686

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833686
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13019535
Sequences flagged as poor quality0
Sequence length51-126
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG59400.014.346466120
GCCGTAT591300.010.55525120
AAAAAAA1395850.010.417361120
CGTATCA485450.010.322504120
CGCCGTA639600.09.880137120
GTATCAT505650.09.755843120
GTCGCCG761550.09.740093120
TGGTCGC849900.09.624342120
CCGTATC546750.09.560319120
GGTCGCC789050.09.545138120
TCTCGGG21800.09.3597765120
GTGGTCG924000.09.274688120
GGTGGTC1005150.09.266248120
TCGGTGG1188650.09.047468120
TCGCCGT717400.08.967605120
CGGTGGT1104850.08.88091120
TCTCGGT1370900.08.39626120
CTCGGTG1275150.08.111895118-119
CTAGGCA8304.706618E-47.95193051
CCTAGTG10701.3887449E-57.8505891
Produced by FastQC (version 0.11.5)