FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15863530
Sequences flagged as poor quality0
Sequence length50-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG72450.010.526836120
TGGTCGC369950.08.635772120
GTGGTCG411600.08.5205965120
AGATCTC687300.08.45788120
GGTGGTC446500.08.365684120
GGTCGCC360150.08.087064120
CTCGGTG545500.08.069409120
TCTCGGT582600.07.9987803120
CGCCGTA315900.07.908174120
ATCTCGG631450.07.865006120
GATCTCG645900.07.837811120
TAGATCT723300.07.812745120
TCGGTGG524150.07.8023257120
AAAAAAA760750.07.672852120
CGGTGGT509950.07.5720916120
GTCGCCG377650.07.5532985120
AGTGTAG957300.07.521486120
GCCGTAT336650.07.4029016120
CGTATCA293050.07.29526120
GTGTAGA930300.07.1781793120
Produced by FastQC (version 0.11.5)