FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10318143
Sequences flagged as poor quality0
Sequence length60-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG320300.09.065718120
GAGTGTA342350.08.166376120
TAGATCT241950.08.108415120
AGATCTC242600.07.9135795120
AGAGTGT368700.07.680416118-119
TCTCGGT213550.07.4449205120
GATCTCG255050.07.339104120
TAGGGAA559450.07.185009120
AAGAGTG407000.07.13452120
GTAGATC320900.07.1231120
CTCGGTG221700.07.0900517120
GTGTAGA318500.07.0449185120
TGTAGAT333000.07.0084043120
GTAGGGA589250.06.964185120
TGGTCGC155950.06.809287120
ATCTCGG235700.06.7707677118-119
TCGGTGG205250.06.693698120
TGTAGGG620100.06.5548606118-119
GTGGTCG172350.06.370208120
TCGTGTA727900.06.2475715120
Produced by FastQC (version 0.11.5)