FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11361171
Sequences flagged as poor quality0
Sequence length57-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG46050.011.724667120
GGTCGCC255900.010.315019120
TGGTCGC272850.010.135953120
GTCGCCG251750.010.032293120
GTGGTCG302650.09.851522120
GGTGGTC339650.09.290557120
TCGGTGG411150.09.279924120
CTCGGTG431900.09.111885120
ATCTCGG501350.09.09411120
TCTCGGT461550.08.877478120
TCGCCGT245900.08.538806120
CGGTGGT396750.08.482689120
TAGATCT591300.08.400596120
CGCCGTA218050.08.336316120
GATCTCG539900.08.100314118-119
AGATCTC567650.07.9791007120
GCCGTAT231650.07.9245887120
CGTATCA203450.07.7255826120
GTGTAGA758850.07.660471120
GTAGATC736200.07.6516905120
Produced by FastQC (version 0.11.5)