FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17471467
Sequences flagged as poor quality0
Sequence length56-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1564150.011.502853120
CGTATCA625850.09.777716120
GCGTCGG124350.09.504471120
CCGTATC715700.08.91904120
CGCCGTA827400.08.831597120
GGTCGCC983300.08.700436120
GTATCAT630200.08.615444120
TGGTCGC1032750.08.591727120
GTGGTCG1111300.08.5134945120
TCATTAA546750.08.273515120
GCCGTAT774950.08.198412120
CATTAAA562500.07.9565325120
GGTGGTC1194200.07.9375696120
CGGTGGT1304850.07.8621807120
CTCGGTG1486800.07.7151227120
TCGGTGG1383350.07.658895120
GTCGCCG994350.07.608225120
TCGCCGT942100.07.584418120
CCCCCCA11152.4062085E-57.5329381
ATCATTA603300.07.4980016120
Produced by FastQC (version 0.11.5)