FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13429822
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA2205900.014.331554120
TCATTAA682850.09.0854435120
CGTATCA872200.09.046083120
ATCATTA760300.08.9412120
CCGTATC981900.08.70149120
GTATCAT843000.08.61921120
CATTAAA656100.08.504795120
GCCGTAT1049650.08.471389120
TATCATT862150.08.246819120
CGCCGTA1116600.08.054803120
TGGTCGC1417050.08.032173120
GGTCGCC1343650.07.984216120
TCGCCGT1229450.07.95477120
GGTGGTC1624350.07.8973074120
GTCGCCG1308250.07.874636120
GTGGTCG1521450.07.5362263120
CGGTGGT1756650.07.445986120
ATTAAAA760400.07.3224564120
TCGGTGG1854550.07.0270357118-119
TTAAAAA746400.06.672021120
Produced by FastQC (version 0.11.5)