FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004833746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004833746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13720532
Sequences flagged as poor quality0
Sequence length58-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG509300.09.448244120
TAGATCT370000.09.421603120
GAGTGTA552150.09.236603120
AGATCTC367000.09.122598120
TCGGTGG267750.08.806705120
CTCGGTG305600.08.619094120
AGAGTGT601000.08.565708120
GTAGATC509550.08.454502120
GTGTAGA494250.08.339892120
TCTCGGT304700.08.309796120
GGTGGTC232300.08.265158120
ATCTCGG346200.08.23222120
AAGAGTG661950.08.103315120
GTGGTCG206900.07.916852120
TGGTCGC193000.07.7720056120
TGTAGAT520450.07.701013120
GATCTCG379600.07.6817555120
CGGTGGT274550.07.5614495120
TAGGGAA959850.07.532412120
GTAGGGA1009550.07.458754120
Produced by FastQC (version 0.11.5)